RNAJunction Database - Junction Profile:10419
Links: Download Junction Jmol Scanner Output PDB SCOR MMDB

Entry # 10419: 2DR8_j2_B-G12_B-A17

Primary Citation: (from PDB entry 2DR8)

K.TOMITA R.ISHITANI S.FUKAI O.NUREKI COMPLETE CRYSTALLOGRAPHIC ANALYSIS OF THE DYNAMICS OF CCA SEQUENCE ADDITION NATURE V. 443 956 2006

Experimental Method: X-RAY_DIFFRACTION

Structure Images
3d structure of junction secondary structure of junction

Click to launch 3D viewer Jmol | Larger 3D image | Created with Raster3D and RNAView

Derived Information
Type:Bulge LoopCluster:2CV2 j2 C-G553 C-A558 
NC-IUBMB Classification:2HS2Cluster Page
Angles: 142°
Fit Criteria: C
Extracted Structure:Download
Minimized Structure:Download RMSD = 1.16702Å

For more detailed information view the raw JunctionScanner output.

Sequence

Strand 1: Chain B: GAUUCC 6nt

Strand 2: Chain B: GGUU 4nt

Valid XHTML 1.0 Transitional