RNAJunction Database - Junction Profile:10411
Links: Download Junction Jmol Scanner Output PDB SCOR MMDB

Entry # 10411: 2D2K_j2_C-G21_D-G36

Primary Citation: (from PDB entry 2D2K)

S.ALAM V.GRUM-TOKARS J.KRUCINSKA M.L.KUNDRACIK J.E.WEDEKIND CONFORMATIONAL HETEROGENEITY AT POSITION U37 OF AN ALL-RNA HAIRPIN RIBOZYME WITH IMPLICATIONS FOR METAL BINDING AND THE CATALYTIC STRUCTURE OF THE S-TURN BIOCHEMISTRY V. 44 14396 2005

Experimental Method: X-RAY_DIFFRACTION

Structure Images
3d structure of junction secondary structure of junction

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Derived Information
Type:Bulge LoopCluster:1M5V j2 B-G21 B-G55 
NC-IUBMB Classification:HS4HS6Cluster Page
Angles: 150°
Fit Criteria: A
Extracted Structure:Download
Minimized Structure:Download RMSD = 0.54142Å

For more detailed information view the raw JunctionScanner output.

Sequence

Strand 1: Chain C: GAGAAACACA 10nt

Strand 2: Chain D: UGGUAUAUUACC 12nt

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