RNAJunction Database - Junction Profile:1013
Links: Download Junction Jmol Scanner Output PDB SCOR MMDB

Entry # 1013: 1I95_j4_A-G921_A-A1217_A-C1277_A-G1315

Primary Citation: (from PDB entry 1I95)

M.PIOLETTI F.SCHLUENZEN J.HARMS R.ZARIVACH M.GLUEHMANN H.AVILA H.BARTELS C.JACOBI T.HARTSCH A.YONATH F.FRANCESCHI CRYSTAL STRUCTURES OF COMPLEXES OF THE SMALL RIBOSOMAL SUBUNIT WITH TETRACYCLINE, EDEINE AND IF3 EMBO J. V. 20 1829 2001

Experimental Method: X-RAY_DIFFRACTION

Structure Images
3d structure of junction secondary structure of junction

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Derived Information
Type:4-wayCluster:1J5E j4 A-G944 A-A1236 A-C1296 A-G1334 
NC-IUBMB Classification:Cluster Page
Angles: 23:45:63:69:90:107°
Fit Criteria: A
Extracted Structure:Download
Minimized Structure:Download RMSD = 0.83281Å

For more detailed information view the raw JunctionScanner output.

Sequence

Strand 1: Chain A: CUACAAUGCC 10nt

Strand 2: Chain A: GUGGAG 6nt

Strand 3: Chain A: GGCCCAGUUCGG 12nt

Strand 4: Chain A: AAGCCGGAAU 10nt

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