############# Start of Description of junction: j2 # Number of strands: NUM_STRANDS = 2 LILLEY = 2HS1 FINGERPRINT = 164 LOOP_LENGTH_SUM = 1 KISSING_LOOP = FALSE INTERNAL_HELICES = NULL ## Properties of strand 1 S1_NAME_ID5 = 14 S1_NAME_ID3 = 19 S1_NUM_ID5_ORIG = 14 S1_NUM_ID3_ORIG = 19 S1_NAME2_ID5 = 16 S1_NAME2_ID3 = 17 S1_NUM2_ID5_ORIG = 16 S1_NUM2_ID3_ORIG = 17 S1_SQ2 = AC S1_SQLEN2 = 2 S1_SQ = ACACAG S1_SQLEN = 6 S1_CHAR = A ## Properties of strand 2 S2_NAME_ID5 = 5 S2_NAME_ID3 = 11 S2_NUM_ID5_ORIG = 5 S2_NUM_ID3_ORIG = 11 S2_NAME2_ID5 = 7 S2_NAME2_ID3 = 9 S2_NUM2_ID5_ORIG = 7 S2_NUM2_ID3_ORIG = 9 S2_SQ2 = GAG S2_SQLEN2 = 3 S2_SQ = CUGAGGU S2_SQLEN = 7 S2_CHAR = B ## Properties of helix 1 H1_INID = 1 H1_OUTID = 7 H1_INID2 = 3 H1_OUTID2 = 5 H1_INID2_ORIG = 16 H1_OUTID2_ORIG = 9 H1_INSEQ_CHAR = A H1_OUTSEQ_CHAR = B # Position: H1_P_X = 62.80138936293838 H1_P_Y = 12.132787070175818 H1_P_Z = 19.340165917789502 # Orientation: H1_DX_X = -0.20456739973240445 H1_DX_Y = 0.8380607407570597 H1_DX_Z = -0.5057730457116634 H1_DY_X = -0.03974024340140403 H1_DY_Y = 0.5091633359880046 H1_DY_Z = 0.8597519469823638 H1_DZ_X = 0.9780454447627278 H1_DZ_Y = 0.19597676415150467 H1_DZ_Z = -0.07085348185929519 ## Properties of helix 2 H2_INID = 1 H2_OUTID = 6 H2_INID2 = 3 H2_OUTID2 = 4 H2_INID2_ORIG = 7 H2_OUTID2_ORIG = 17 H2_INSEQ_CHAR = B H2_OUTSEQ_CHAR = A # Position: H2_P_X = 43.8568822899739 H2_P_Y = 12.570205408986734 H2_P_Z = 21.26968869136916 # Orientation: H2_DX_X = -0.003283829387967785 H2_DX_Y = -0.3331736500896607 H2_DX_Z = -0.9428597644138215 H2_DY_X = -0.07090842788816332 H2_DY_Y = -0.9404138900764973 H2_DY_Z = 0.33255632636534926 H2_DZ_X = -0.9974774239645612 H2_DZ_Y = 0.06794876185126242 H2_DZ_Z = -0.020536660972531706 ############# END of Description of junction: j2