#############  Start of Description of junction: j1
# Number of strands:
NUM_STRANDS = 2
LILLEY = 2HS1
FINGERPRINT = 172
LOOP_LENGTH_SUM = 1
KISSING_LOOP = FALSE
INTERNAL_HELICES = NULL
## Properties of strand 1
S1_NAME_ID5 =  1407
S1_NAME_ID3 = 1412
S1_NUM_ID5_ORIG =  1407
S1_NUM_ID3_ORIG = 1412
S1_NAME2_ID5 =  1409
S1_NAME2_ID3 = 1410
S1_NUM2_ID5_ORIG =  1409
S1_NUM2_ID3_ORIG = 1410
S1_SQ2 = CU
S1_SQLEN2 = 2
S1_SQ = CGCUAG
S1_SQLEN = 6
S1_CHAR = A
## Properties of strand 2
S2_NAME_ID5 =  1488
S2_NAME_ID3 = 1494
S2_NUM_ID5_ORIG =  1488
S2_NUM_ID3_ORIG = 1494
S2_NAME2_ID5 =  1490
S2_NAME2_ID3 = 1492
S2_NUM2_ID5_ORIG =  1490
S2_NUM2_ID3_ORIG = 1492
S2_SQ2 = AAA
S2_SQLEN2 = 3
S2_SQ = CUAAAAG
S2_SQLEN = 7
S2_CHAR = B
## Properties of helix 1
H1_INID = 1
H1_OUTID = 7
H1_INID2 = 3
H1_OUTID2 = 5
H1_INID2_ORIG = 1409
H1_OUTID2_ORIG = 1492
H1_INSEQ_CHAR = A
H1_OUTSEQ_CHAR = B
# Position:
H1_P_X = 19.157464862447917
H1_P_Y = -0.672801009106184
H1_P_Z = 35.34392399748167
# Orientation:
H1_DX_X = 0.8874553480734377
H1_DX_Y = 0.4518256327721081
H1_DX_Z = 0.09097583605517201
H1_DY_X = 0.4511053697536944
H1_DY_Y = -0.8919826603198939
H1_DY_Z = 0.02951066024383664
H1_DZ_X = 0.09448254100751541
H1_DZ_Y = 0.014850294903749672
H1_DZ_Z = -0.9954157514255186
## Properties of helix 2
H2_INID = 1
H2_OUTID = 6
H2_INID2 = 3
H2_OUTID2 = 4
H2_INID2_ORIG = 1490
H2_OUTID2_ORIG = 1410
H2_INSEQ_CHAR = B
H2_OUTSEQ_CHAR = A
# Position:
H2_P_X = 18.70186986426518
H2_P_Y = -1.601882680150665
H2_P_Z = 53.642274066002784
# Orientation:
H2_DX_X = -0.442830104263372
H2_DX_Y = 0.8962887560292313
H2_DX_Z = -0.023832007335968797
H2_DY_X = -0.8958658166321385
H2_DY_Y = -0.4412289342738114
H2_DY_Z = 0.05235901211473504
H2_DZ_X = 0.03641342263678382
H2_DZ_Y = 0.04453642750791964
H2_DZ_Z = 0.9983439133268206
#############  END of Description of junction: j1