############# Start of Description of junction: j2 # Number of strands: NUM_STRANDS = 2 LILLEY = 2HS1 FINGERPRINT = 159 LOOP_LENGTH_SUM = 1 KISSING_LOOP = FALSE INTERNAL_HELICES = NULL ## Properties of strand 1 S1_NAME_ID5 = 20 S1_NAME_ID3 = 23 S1_NUM_ID5_ORIG = 20 S1_NUM_ID3_ORIG = 23 S1_NAME2_ID5 = 21 S1_NAME2_ID3 = 22 S1_NUM2_ID5_ORIG = 21 S1_NUM2_ID3_ORIG = 22 S1_SQ2 = GA S1_SQLEN2 = 2 S1_SQ = AGAA S1_SQLEN = 4 S1_CHAR = C ## Properties of strand 2 S2_NAME_ID5 = 40 S2_NAME_ID3 = 44 S2_NUM_ID5_ORIG = 40 S2_NUM_ID3_ORIG = 44 S2_NAME2_ID5 = 41 S2_NAME2_ID3 = 43 S2_NUM2_ID5_ORIG = 41 S2_NUM2_ID3_ORIG = 43 S2_SQ2 = UUA S2_SQLEN2 = 3 S2_SQ = AUUAC S2_SQLEN = 5 S2_CHAR = D ## Properties of helix 1 H1_INID = 1 H1_OUTID = 5 H1_INID2 = 2 H1_OUTID2 = 4 H1_INID2_ORIG = 21 H1_OUTID2_ORIG = 43 H1_INSEQ_CHAR = C H1_OUTSEQ_CHAR = D # Position: H1_P_X = 22.159212690543697 H1_P_Y = 27.91798571685559 H1_P_Z = 44.67730238956945 # Orientation: H1_DX_X = 0.5927215469419025 H1_DX_Y = 0.16020217877825615 H1_DX_Z = -0.7893138980820567 H1_DY_X = -0.7189990508144213 H1_DY_Y = -0.33636952298300926 H1_DY_Z = -0.6081906846837981 H1_DZ_X = -0.36293461218070533 H1_DZ_Y = 0.9280036669770659 H1_DZ_Z = -0.08418824952663329 ## Properties of helix 2 H2_INID = 1 H2_OUTID = 4 H2_INID2 = 2 H2_OUTID2 = 3 H2_INID2_ORIG = 41 H2_OUTID2_ORIG = 22 H2_INSEQ_CHAR = D H2_OUTSEQ_CHAR = C # Position: H2_P_X = 25.271484190540146 H2_P_Y = 11.537726141315419 H2_P_Z = 40.392239757899105 # Orientation: H2_DX_X = 0.7218353624013716 H2_DX_Y = 0.6475309334635835 H2_DX_Z = -0.24424864338346453 H2_DY_X = 0.2313933179063845 H2_DY_Y = 0.10679917308663889 H2_DY_Z = 0.9669803871104605 H2_DZ_X = 0.6522352658474944 H2_DZ_Y = -0.754518142151527 H2_DZ_Z = -0.07274291133199284 ############# END of Description of junction: j2