############# Start of Description of junction: j2 # Number of strands: NUM_STRANDS = 2 LILLEY = 2HS1 FINGERPRINT = 167 LOOP_LENGTH_SUM = 1 KISSING_LOOP = FALSE INTERNAL_HELICES = NULL ## Properties of strand 1 S1_NAME_ID5 = 14 S1_NAME_ID3 = 19 S1_NUM_ID5_ORIG = 14 S1_NUM_ID3_ORIG = 19 S1_NAME2_ID5 = 16 S1_NAME2_ID3 = 17 S1_NUM2_ID5_ORIG = 16 S1_NUM2_ID3_ORIG = 17 S1_SQ2 = AC S1_SQLEN2 = 2 S1_SQ = ACACAG S1_SQLEN = 6 S1_CHAR = A ## Properties of strand 2 S2_NAME_ID5 = 5 S2_NAME_ID3 = 11 S2_NUM_ID5_ORIG = 5 S2_NUM_ID3_ORIG = 11 S2_NAME2_ID5 = 7 S2_NAME2_ID3 = 9 S2_NUM2_ID5_ORIG = 7 S2_NUM2_ID3_ORIG = 9 S2_SQ2 = GAG S2_SQLEN2 = 3 S2_SQ = CUGAGGU S2_SQLEN = 7 S2_CHAR = B ## Properties of helix 1 H1_INID = 1 H1_OUTID = 7 H1_INID2 = 3 H1_OUTID2 = 5 H1_INID2_ORIG = 16 H1_OUTID2_ORIG = 9 H1_INSEQ_CHAR = A H1_OUTSEQ_CHAR = B # Position: H1_P_X = -1.4169003004091474 H1_P_Y = 0.2131652656930525 H1_P_Z = 16.87884555277838 # Orientation: H1_DX_X = -0.08827128474437385 H1_DX_Y = 0.899285359836169 H1_DX_Z = 0.42836202197896966 H1_DY_X = -0.9183567651928031 H1_DY_Y = -0.24002544995553388 H1_DY_Z = 0.31465637638264354 H1_DZ_X = 0.3857836597293729 H1_DZ_Y = -0.36561403823974997 H1_DZ_Z = 0.8470521488833107 ## Properties of helix 2 H2_INID = 1 H2_OUTID = 6 H2_INID2 = 3 H2_OUTID2 = 4 H2_INID2_ORIG = 7 H2_OUTID2_ORIG = 17 H2_INSEQ_CHAR = B H2_OUTSEQ_CHAR = A # Position: H2_P_X = -10.226064659029356 H2_P_Y = 8.943563707470345 H2_P_Z = 2.1720610670475997 # Orientation: H2_DX_X = 0.9217455975121709 H2_DX_Y = 0.34450254697060423 H2_DX_Z = -0.17805349925709746 H2_DY_X = 0.1569805308030272 H2_DY_Y = -0.7513127164293341 H2_DY_Z = -0.6410041459151201 H2_DZ_X = -0.35460141908307463 H2_DZ_Y = 0.5628918166595955 H2_DZ_Z = -0.7465993814100895 ############# END of Description of junction: j2