#############  Start of Description of junction: j1
# Number of strands:
NUM_STRANDS = 2
LILLEY = 2HS1
FINGERPRINT = 166
LOOP_LENGTH_SUM = 1
KISSING_LOOP = FALSE
INTERNAL_HELICES = NULL
## Properties of strand 1
S1_NAME_ID5 =  5
S1_NAME_ID3 = 11
S1_NUM_ID5_ORIG =  5
S1_NUM_ID3_ORIG = 11
S1_NAME2_ID5 =  7
S1_NAME2_ID3 = 9
S1_NUM2_ID5_ORIG =  7
S1_NUM2_ID3_ORIG = 9
S1_SQ2 = GAG
S1_SQLEN2 = 3
S1_SQ = CUGAGGU
S1_SQLEN = 7
S1_CHAR = A
## Properties of strand 2
S2_NAME_ID5 =  14
S2_NAME_ID3 = 19
S2_NUM_ID5_ORIG =  14
S2_NUM_ID3_ORIG = 19
S2_NAME2_ID5 =  16
S2_NAME2_ID3 = 17
S2_NUM2_ID5_ORIG =  16
S2_NUM2_ID3_ORIG = 17
S2_SQ2 = AC
S2_SQLEN2 = 2
S2_SQ = ACACAG
S2_SQLEN = 6
S2_CHAR = B
## Properties of helix 1
H1_INID = 1
H1_OUTID = 6
H1_INID2 = 3
H1_OUTID2 = 4
H1_INID2_ORIG = 7
H1_OUTID2_ORIG = 17
H1_INSEQ_CHAR = A
H1_OUTSEQ_CHAR = B
# Position:
H1_P_X = 83.66842059142569
H1_P_Y = 15.045818860284902
H1_P_Z = 19.523504936423056
# Orientation:
H1_DX_X = 0.04282396817924905
H1_DX_Y = -0.44968426790546445
H1_DX_Z = -0.8921603930615305
H1_DY_X = 0.006564975738555745
H1_DY_Y = 0.8930869599433553
H1_DY_Z = -0.44983617359288175
H1_DZ_X = 0.9990610636207009
H1_DZ_Y = 0.013406758648473627
H1_DZ_Z = 0.04119769386273475
## Properties of helix 2
H2_INID = 1
H2_OUTID = 7
H2_INID2 = 3
H2_OUTID2 = 5
H2_INID2_ORIG = 16
H2_OUTID2_ORIG = 9
H2_INSEQ_CHAR = B
H2_OUTSEQ_CHAR = A
# Position:
H2_P_X = 65.59987671920486
H2_P_Y = 12.907353800947668
H2_P_Z = 19.067507937937744
# Orientation:
H2_DX_X = 0.21536452908055992
H2_DX_Y = -0.922921755002104
H2_DX_Z = 0.31911370036045383
H2_DY_X = 0.05432009082045397
H2_DY_Y = 0.3375981529697718
H2_DY_Z = 0.9397216688172385
H2_DZ_X = -0.9750217676273536
H2_DZ_Y = -0.1850484294860042
H2_DZ_Z = 0.12283986078469056
#############  END of Description of junction: j1