#############  Start of Description of junction: j1
# Number of strands:
NUM_STRANDS = 2
LILLEY = HS2HS3
FINGERPRINT = 108
LOOP_LENGTH_SUM = 5
KISSING_LOOP = FALSE
INTERNAL_HELICES = NULL
## Properties of strand 1
S1_NAME_ID5 =  5
S1_NAME_ID3 = 13
S1_NUM_ID5_ORIG =  5
S1_NUM_ID3_ORIG = 13
S1_NAME2_ID5 =  7
S1_NAME2_ID3 = 11
S1_NUM2_ID5_ORIG =  7
S1_NUM2_ID3_ORIG = 11
S1_SQ2 = UCAGU
S1_SQLEN2 = 5
S1_SQ = GCUCAGUAC
S1_SQLEN = 9
S1_CHAR = A
## Properties of strand 2
S2_NAME_ID5 =  18
S2_NAME_ID3 = 25
S2_NUM_ID5_ORIG =  18
S2_NUM_ID3_ORIG = 25
S2_NAME2_ID5 =  20
S2_NAME2_ID3 = 23
S2_NUM2_ID5_ORIG =  20
S2_NUM2_ID3_ORIG = 23
S2_SQ2 = AACC
S2_SQLEN2 = 4
S2_SQ = GGAACCGC
S2_SQLEN = 8
S2_CHAR = A
## Properties of helix 1
H1_INID = 1
H1_OUTID = 8
H1_INID2 = 3
H1_OUTID2 = 6
H1_INID2_ORIG = 7
H1_OUTID2_ORIG = 23
H1_INSEQ_CHAR = A
H1_OUTSEQ_CHAR = A
# Position:
H1_P_X = 7.263078790068087
H1_P_Y = -19.046613983978762
H1_P_Z = 4.662416738719876
# Orientation:
H1_DX_X = 0.5560998698931874
H1_DX_Y = 0.66493342192555
H1_DX_Z = 0.4986145596662377
H1_DY_X = -0.35485668564972617
H1_DY_Y = -0.3525419457579808
H1_DY_Z = 0.8659046766999641
H1_DZ_X = 0.7515515067874388
H1_DZ_Y = -0.6584661881126088
H1_DZ_Z = 0.03990754011432962
## Properties of helix 2
H2_INID = 1
H2_OUTID = 9
H2_INID2 = 3
H2_OUTID2 = 7
H2_INID2_ORIG = 20
H2_OUTID2_ORIG = 11
H2_INSEQ_CHAR = A
H2_OUTSEQ_CHAR = A
# Position:
H2_P_X = 2.2605866874295284
H2_P_Y = 11.474335702145897
H2_P_Z = 6.8653299875006555
# Orientation:
H2_DX_X = 0.2535351384230191
H2_DX_Y = -0.21806469554989505
H2_DX_Z = -0.9424265075535345
H2_DY_X = -0.8805861208532995
H2_DY_Y = 0.35119987563489374
H2_DY_Z = -0.31816148590704074
H2_DZ_X = 0.40035985980784794
H2_DZ_Y = 0.9105528188462042
H2_DZ_Z = -0.1029832352660991
#############  END of Description of junction: j1