############# Start of Description of junction: j5 # Number of strands: NUM_STRANDS = 2 LILLEY = 2HS1 FINGERPRINT = 161 LOOP_LENGTH_SUM = 1 KISSING_LOOP = FALSE INTERNAL_HELICES = NULL ## Properties of strand 1 S1_NAME_ID5 = 662 S1_NAME_ID3 = 668 S1_NUM_ID5_ORIG = 662 S1_NUM_ID3_ORIG = 668 S1_NAME2_ID5 = 664 S1_NAME2_ID3 = 666 S1_NUM2_ID5_ORIG = 664 S1_NUM2_ID3_ORIG = 666 S1_SQ2 = GAG S1_SQLEN2 = 3 S1_SQ = GAGAGGG S1_SQLEN = 7 S1_CHAR = I ## Properties of strand 2 S2_NAME_ID5 = 738 S2_NAME_ID3 = 743 S2_NUM_ID5_ORIG = 738 S2_NUM_ID3_ORIG = 743 S2_NAME2_ID5 = 740 S2_NAME2_ID3 = 741 S2_NUM2_ID5_ORIG = 740 S2_NUM2_ID3_ORIG = 741 S2_SQ2 = UG S2_SQLEN2 = 2 S2_SQ = CCUGGU S2_SQLEN = 6 S2_CHAR = J ## Properties of helix 1 H1_INID = 1 H1_OUTID = 6 H1_INID2 = 3 H1_OUTID2 = 4 H1_INID2_ORIG = 664 H1_OUTID2_ORIG = 741 H1_INSEQ_CHAR = I H1_OUTSEQ_CHAR = J # Position: H1_P_X = 21.68628385594355 H1_P_Y = 66.98483636824363 H1_P_Z = 30.682079322541842 # Orientation: H1_DX_X = -0.8655614849712947 H1_DX_Y = 0.07710910653028691 H1_DX_Z = -0.4948307805951231 H1_DY_X = -0.13531004524545054 H1_DY_Y = -0.9873350225728217 H1_DY_Z = 0.08282961340488626 H1_DZ_X = -0.4821768424447157 H1_DZ_Y = 0.13864969848950182 H1_DZ_Z = 0.8650328049957494 ## Properties of helix 2 H2_INID = 1 H2_OUTID = 7 H2_INID2 = 3 H2_OUTID2 = 5 H2_INID2_ORIG = 740 H2_OUTID2_ORIG = 666 H2_INSEQ_CHAR = J H2_OUTSEQ_CHAR = I # Position: H2_P_X = 26.92974323114097 H2_P_Y = 67.3004963456764 H2_P_Z = 11.389114501750715 # Orientation: H2_DX_X = -0.23118349599919696 H2_DX_Y = 0.9712301465966675 H2_DX_Z = -0.057150621338696084 H2_DY_X = 0.9532511549644944 H2_DY_Y = 0.23787001619847103 H2_DY_Z = 0.18636011094808325 H2_DZ_X = 0.1945929770994752 H2_DZ_Y = -0.011395513834273174 H2_DZ_Z = -0.9808178809177655 ############# END of Description of junction: j5